[gmx-users] Implicit solvent & PBC

[Berk Hess]

Hi,

The same as in normal simulations.
I always use PME and PBC in my implicit solvent simulations.

Berk


> From: X.Periole at rug.nl
> Subject: Re: [gmx-users] Implicit solvent & PBC
> To: gmx-users at gromacs.org
> Date: Fri, 19 Sep 2008 14:52:39 +0200
> 
> On Fri, 19 Sep 2008 17:28:20 +0530 (IST)
>   Anirban Ghosh <anirbanz83 at yahoo.co.in> wrote:
> > Hi All,
> > 
> > I am simulating a Coarse Grained model using implicit solvent condition. Can 
> >Periodic Boundary Condition and Particle-Mesh-Ewald be used with implicit 
> >solvent simulation? 
> What would be the use of PME and PBC in implicit solvent?
> > Thanks,
> > 
> > 
> > 
> > 
> > Anirban Ghosh
> > M.Tech Bioinformatics
> > University of Hyderabad
> > 
> > 
> > 
> >      Unlimited freedom, unlimited storage. Get it now, on 
> >http://help.yahoo.com/l/in/yahoo/mail/yahoomail/tools/tools-08.html/
> 
> -----------------------------------------------------
> XAvier Periole - PhD
> 
> Molecular Dynamics Group / NMR and Computation
> University of Groningen
> The Netherlands
> -----------------------------------------------------
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