[gmx-users] Doubt regarding membrane protein in POPC bilayer
pawan.chinari at gmail.com
Wed Apr 1 05:51:51 CEST 2009
Greetings from Pawan.
Thanks for your information.
On Tue, Mar 31, 2009 at 5:50 PM, Justin A. Lemkul <jalemkul at vt.edu> wrote:
> Pawan Kumar wrote:
>> Respected Sir,
>> Greetings from Pawan.
>> Thanks for all your kind help and suggestions.
>> I will work on this and ask you if I have further doubts.
>> Is it fine if I use the perl code given in
>> wiki.gromacs.org/membrane-simulations <
>> http://wiki.gromacs.org/membrane-simulations> for solvation after the
>> genbox step to remove extra waters from the hydrophobic part of the bilayer
> You mean the C program or shell script at
> http://wiki.gromacs.org/index.php/Membrane_Simulations? Yes, either of
> those should be fine.
> Thanking you,
>> Yours sincerely,
>> Justin A. Lemkul
>> Graduate Research Assistant
>> ICTAS Doctoral Scholar
>> Department of Biochemistry
>> Virginia Tech
>> Blacksburg, VA
>> jalemkul[at]vt.edu | (540) 231-9080
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