[gmx-users] density around protein

Morteza Khabiri khabiri at greentech.cz
Sun Apr 5 17:24:55 CEST 2009

Dear gmxusers

I want to calculate the density of solvent around protein.
I already tried the commands g_density and g_densmap but the results are
not the the things that I want. The g_density Compute partial densities
across the box and g_densmap just give me one black and white photo which
don't have sense. Is it possible to compute the number of density with
other commands of gromacs?

Before thanks


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