[gmx-users] Doubt regarding membrane protein in POPC bilayer

[Pawan Kumar]

Respected Sir,

Thanks for your mail.
I will work on this.

Thanking you,
Pawan


On 4/7/09, Mark Abraham <Mark.Abraham at anu.edu.au> wrote:
>
> Pawan Kumar wrote:
>
>> Hello Sir,
>>
>> Can you please tell me how to couple ions with SOL ?
>> Is there any command in gromacs to do that ?
>>
>
> You need to define a group with SOL and the ions in an index file. This is
> uses as input to grompp so that it can make sense of the same group name
> when used in the .mdp file. See
> http://wiki.gromacs.org/index.php/Index_File
>
> Mark
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the www interface
> or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20090407/864b5339/attachment.html>