[gmx-users] Mg ion not recognize.

[akalabya bissoyi]

"hello gromacs, i am trying to simulate my protein ligand complex but my
protein contains Mg ion and while running Gromacs error is coming in command
pdb2gmx.It is not able to recognize Mg ion.
I included the coordinates for Mg ion in protein pdb file.And when i
included coordinates for Mg ion in ligand file , Prodrg server was showing
error during generation of ligand toplogy file as it doesnt include Mg ion.
So pls suggest me how can i do this job.."


AKALABYA BISSOYI.
N.I.T.Rourkela
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20090413/d081f362/attachment.html>