[gmx-users] restart problem

kyungchan chae ckcumaa at umich.edu
Mon Apr 13 19:33:24 CEST 2009


I've installed version 4.0.4 and tried again but still have the same 
problem in restarting my simulation with a checkpoint file.
I'm uisng 4 cpus in 1 node and double precision options:
     mpirun -np 4 mdrun_d -cpi state.cpt -append yes -cpt 30

The error message is:

    "Program mdrun_d, VERSION 4.0.4
      Source code file: checkpoint.c, line: 1241

      Fatal error:
      Truncation of file traj.trr failed."

If someone has any advice please let me know.
Thank you

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