[gmx-users] strange behavior upon compiling 4.0.4

[Ken Rotondi]

Yes sir, that was the problem

Many thanks,

Ken



On Apr 16, 2009, at 3:33 PM, David van der Spoel wrote:

> Ken Rotondi wrote:
>> Hello all,
>> I'm trying to help a student build gromacs_4.0.4 on a MacBook Pro  
>> running 10.5. The program configures with out a hitch, but  
>> compiling with the make command ends in a recursive error. It seems  
>> that it's not finding something that it should have installed  
>> itself, but I wouldn't be surprised if I was wrong.
>> Any ideas?
>
> Could be because there is a space in a directory name.
>
>
>> Thanks,
>> Ken
>> mkdir .libs
>> rm -fr .libs/libnonbonded.lax
>> mkdir .libs/libnonbonded.lax
>> rm -fr .libs/libnonbonded.lax/libnb_kernel_ia32_sse.a
>> mkdir .libs/libnonbonded.lax/libnb_kernel_ia32_sse.a
>> Extracting /Users/jkoelmel/Desktop/college and IB/college/current
>> classes/BioChem/GROMACS/gromacs-4.0.4/src/gmxlib/nonbonded/ 
>> nb_kernel_ia32_sse/.libs/libnb_kernel_ia32_sse.a (cd .libs/ 
>> libnonbonded.lax/libnb_kernel_ia32_sse.a && ar x
>> /Users/jkoelmel/Desktop/college and IB/college/current
>> classes/BioChem/GROMACS/gromacs-4.0.4/src/gmxlib/nonbonded/ 
>> nb_kernel_ia32_sse/.libs/libnb_kernel_ia32_sse.a) ar: /Users/ 
>> jkoelmel/Desktop/college: No such file or directory
>> make[5]: *** [libnonbonded.la] Error 1
>> make[4]: *** [all-recursive] Error 1
>> make[3]: *** [all-recursive] Error 1
>> make[2]: *** [all-recursive] Error 1
>> make[1]: *** [all] Error 2
>> make: *** [all-recursive] Error 1
>> Dr. KS Rotondi
>> The Departments of Chemistry & Biochemistry and Molecular Biology
>> The University of Massachusetts - Amherst
>> 815B LGRT
>> Amherst, MA 01075
>> ksr at chemistry.umass.edu
>> Phone:    413-545-1591
>> Fax:        413-545-4490
>> "If there's a solution, why worry? If there's no solution, why  
>> worry?"
>>    The Dali Lama
>> _______________________________________________
>> gmx-users mailing list    gmx-users at gromacs.org
>> http://www.gromacs.org/mailman/listinfo/gmx-users
>> Please search the archive at http://www.gromacs.org/search before  
>> posting!
>> Please don't post (un)subscribe requests to the list. Use thewww  
>> interface or send it to gmx-users-request at gromacs.org.
>> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>
>
> -- 
> David van der Spoel, Ph.D., Professor of Biology
> Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala  
> University.
> Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205. Fax: +4618511755.
> spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before  
> posting!
> Please don't post (un)subscribe requests to the list. Use the www  
> interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php