[gmx-users] oxygen itp

Justin A. Lemkul jalemkul at vt.edu
Fri Apr 24 13:52:38 CEST 2009



Sunil Thapa wrote:
> Respectable Experts
> I am very grateful to Justin.
> Yes I have defined the atom OB with its mass in the ffgmx.atp file. 
> I have also defined the residue OMOL in ffgmx.rtp file that I am using.
>  

Any particular reason for using ffgmx?  It is deprecated; the newer Gromos96 
variants are more reliable for modern simulations.

-Justin

> Thank you
>  
>  
>  
>  
> 
> 
> 
> ------------------------------------------------------------------------
> 
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php

-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================



More information about the gromacs.org_gmx-users mailing list