[gmx-users] XTC.error
He, Yang
yang.he at mavs.uta.edu
Sun Apr 26 20:25:10 CEST 2009
Hi all users,
When I run the mdrun command, it always shows that XTC.error. Then I check the md.log file and find that:
There are 220 atoms in your xtc output selection
Energies (kJ/mol)
Bond G96Angle Proper Dih. LJ (SR) Coulomb (SR)
3.91620e+05 9.58742e+03 1.93313e+04 -1.12241e+01 0.00000e+00
Potential Kinetic En. Total Energy Temperature Pressure (bar)
4.20528e+05 nan nan nan 0.00000e+00
-------------------------------------------------------
Program mdrun, VERSION 3.3.1
Source code file: stat.c, line: 257
Fatal error:
XTC error
The total energy is shown"nan" I also checked my gro file but there are no lapped atoms. And when I run the command "grompp", there is no any warnings.
Can anybody tell me what is the problem about this error?
Thank you very much.
Yang
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