[gmx-users] diffusion of oxygen in water

Sunil Thapa mephysik at yahoo.com
Thu Jan 1 11:17:13 CET 2009


RESPECTABLE EXPERTS
 
HAPPY NEW YEAR 
 
I am a beginner in gromacs. I want to know if it is possible to study the diffusion of oxygen (as solute ) gas in water (solvent) with the current features of gromacs. 
 
Does gromacs present the required forcefields?
How can I make the corresponding pdb file for oxygen as solute?
 
Your help will be gift from god
Sunil
TU, Nepal


      
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