Subject: Re: Re: [gmx-users] Gromacs 4 bug?
patrick fuchs
patrick.fuchs at univ-paris-diderot.fr
Thu Jan 8 10:17:46 CET 2009
Hi Berk,
I tried this fix, but mdrun_mpi is still hanging. I'll try to use the
debugger by the end of the week and let you know.
Cheers,
Patrick
Berk Hess a écrit :
> Hi,
>
> My guess is that this is not the problem.
> But it is very easy to try, so please do.
> The diff for src/gmxlib/pbc.c is:
> 392c392,393
> < try[d] == 0;
> ---
> > try[d] = 0;
> > pos[d] = 0;
>
> Berk
>
> > Date: Tue, 6 Jan 2009 18:37:20 +0100
> > From: patrick.fuchs at univ-paris-diderot.fr
> > To: gmx-users at gromacs.org
> > Subject: Re: Subject: Re: Re: [gmx-users] Gromacs 4 bug?
> >
> > Hi,
> >
> > > I also fixed a problem with unitialized variables for pbc calculations
> > > in trilinic boxes.
> > > But up till now I have not observed any effect of this bug.
> > > Is your box triclinic?
> > Yes it is. So shall I test your corrected version ?
> >
> > Patrick
> >
>
>
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Patrick FUCHS
Equipe de Bioinformatique Genomique et Moleculaire
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