[gmx-users] smd_forces

[Justin A. Lemkul]

rams rams wrote:
> Dear Users,
> 
> Is there any criterion one should look for while defining the force (in 
> absence of the experimental AFM studies) to pull the groups while 
> performing the Steered Moleculear Dynamics simulations??
> 

The first step is probably a thorough literature search regarding similar 
systems to see what other people are doing.  You also got some pretty good 
advice the other day:

http://www.gromacs.org/pipermail/gmx-users/2009-January/038940.html

-Justin

> Thanks
> Ram.
> 
> 
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-- 
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Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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