[gmx-users] Quantitative output for g_mdmat ... a better way to list residue contacts

maria goranovic mariagoranovic at gmail.com
Wed Jan 21 12:38:37 CET 2009


Dear Experts,

I have a protein simulation from which I want to list residue-residue
contacts. g_mdmat and xpm2ps provide a nice picture, but it would be nice to
just have a list of contacts. Specifically ... which residues make contacts
with which other residues.

Is there a way to do this?

Thank you

-Maria

-- 
Maria G.
Technical University of Denmark
Copenhagen
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