[gmx-users] compiling gromacs

[Justin A. Lemkul]

Pedro Alberto Valiente Flores wrote:
> Hi:
> I am trying to compile gromacs 4.03_mpi in ubuntu hardy. 
> I use this comand-line:
> ./configure --enable-mpi --prefix=$HOME/software/gmx403 MPICC=
> $HOME/software/openmpi/bin/mpicc CPPFLAGS="-I
> $HOME/software/openmpi/include -I$HOME/software/fftw/include/"
> LDFLAGS="-L$HOME/software/openmpi/lib -L$HOME/software/fftw/lib/"
> --program-suffix=_403_mpi --enable-shared
> 
> but i have this error in the config.log file
> 
> conftest.c:19:2: error: #error not catamount
> 

Right, because you probably aren't using Cray XT3.  Therefore, this is normal 
(at least, I see it in my config.log files, too).  As long as the configuration 
finished, then you should be fine to continue on to compilation.

-Justin

-- 
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Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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