[gmx-users] .mdp => Dihedral Angles conflict Bond Constraints ?

XAvier Periole x.periole at rug.nl
Mon Jul 6 21:59:43 CEST 2009


No.

On Jul 6, 2009, at 20:58, Chih-Ying Lin <chihying2008 at gmail.com> wrote:

>
>
> Hi
> In the .mdp file, i set lincs-warnangle = 30.
> Will the dihedral angles be affected?
> Will the maximum, possible values of the dihedral angles be reduced  
> because of the setup of the bond constraints?
>
> Thank you
> Lin
>
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> ;	OPTIONS	FOR	BONDS
> constraints	=	all-bonds	
> constraint-algorithm	=	Lincs	
> unconstrained-start	=	yes	
> lincs-order	=	4	
> lincs-iter	=	1	
> lincs-warnangle	=	30	
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