[gmx-users] .mdp => Dihedral Angles conflict Bond Constraints ?
XAvier Periole
x.periole at rug.nl
Mon Jul 6 21:59:43 CEST 2009
No.
On Jul 6, 2009, at 20:58, Chih-Ying Lin <chihying2008 at gmail.com> wrote:
>
>
> Hi
> In the .mdp file, i set lincs-warnangle = 30.
> Will the dihedral angles be affected?
> Will the maximum, possible values of the dihedral angles be reduced
> because of the setup of the bond constraints?
>
> Thank you
> Lin
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> ; OPTIONS FOR BONDS
> constraints = all-bonds
> constraint-algorithm = Lincs
> unconstrained-start = yes
> lincs-order = 4
> lincs-iter = 1
> lincs-warnangle = 30
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