[gmx-users] make_ndx option

Rubben Torella rubben.torella at gmail.com
Thu Jul 9 12:14:48 CEST 2009


Hi Anirban,
when you choose in make_ndx, you choose group 3 and (&) r 2 3 4 5 6...and so
on...
in make_ndx there is a legend that explain this passage well...
Bye!

2009/7/9 Anirban Ghosh <anirbanz83 at yahoo.co.in>

> Hi ALL,
>
> I want to create an index file using make_ndx which will contain only
> C-alpha atoms of some residues (like from residue no 2-10, res 25-30, res
> 36-40). How should I give this option in make_ndx. Any suggestion is
> welcome.
>
> Regards,
>
>
>
> *Anirban Ghosh*
> *Grade Based Engineer
> Bioinformatics Team
> Centre for Development of Advanced Computing (C-DAC)
> Pune, India
> *
>
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