[gmx-users] How to Run Energy Minimisation

[Justin A. Lemkul]

Nancy wrote:
> Hello,
> 
> I am trying to run energy minimisation on a lipid bilayer (downloaded 
> from: http://moose.bio.ucalgary.ca/files/dppc128.pdb).  I inflated the 
> bilayer using "InflateGRO" however, when I try to run the minimisation, 
> it seems to display the un-inflated bilayer.  Please advise.
> 

Without seeing the command lines that you're issuing, we can only assume you are 
doing something wrong.

-Justin

> Thank you.
> 
> Nancy
> 
> 
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-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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