[gmx-users] How VMD to display the velocity

Dechang Li li.dc06 at gmail.com
Thu Mar 5 07:44:04 CET 2009

Dear all, 

    Is there any methods to display the velocity of the atoms using 
VMD? I saw that in the .gro file, it contains six columns. The last
columns are the vector of the velocity. Can I display the velocity 
in VMD using arrows, with which the orientation and the magnitude
can be displayed by the arrowhead and the length of the arrows? If NO,
how can I do this work with other package?
    Thanks in advance!

Best regards,

Dechang Li, Ph.D Candidate
Department of Engineering Mechanics
Tsinghua University
Beijing 100084
P.R. China 

Tel:   +86-10-62773574(O) 
Email: lidc02 at mails.tsinghua.edu.cn


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