[gmx-users] problem running grompp - error message here

victor doss victordoss64 at hotmail.com
Thu Mar 5 18:34:59 CET 2009


when I run grompp  I get the following error message
always. Whoever has  a correct fix to get rid of this error message and
get the actual result,  Please suggest.

Thanking you

Dr. Victor A. Doss

processing topology...
Generated 332520 of the 332520 non-bonded parameter combinations
Generating 1-4 interactions: fudge = 0.5
Generated 332520 of the 332520 1-4 parameter combinations
Excluding 3 bonded neighbours for Protein_A 1
Excluding 2 bonded neighbours for SOL 82
Excluding 2 bonded neighbours for SOL 9514
  System has non-zero total charge: 8.000000e+00

processing coordinates...
double-checking input for internal consistency...

Program grompp, VERSION 3.3.3
Source code file: ../../../../src/kernel/grompp.c, line: 1134

Fatal error:
There were 3 error(s) processing your input

"Can't You Make This Thing Go Faster ?" (Black Crowes)

dv at dv-laptop:~/g

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