[gmx-users] How to build a coarse grained model and do the simulation with Gromacs

Justin A. Lemkul jalemkul at vt.edu
Fri Mar 6 04:08:46 CET 2009



Justin A. Lemkul wrote:

>> 1. write a gro/pdb file of the model (can VMD do this?)
> 
> VMD will create an all-atom force structure.

*Edit* "all-atom structure."  My brain got caught between all-atom force field 
and structure...been one of those days.

-Justin

-- 
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Justin A. Lemkul
Graduate Research Assistant
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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