[gmx-users] Can make_ndx generate indices only for heavy atoms?

Justin A. Lemkul jalemkul at vt.edu
Fri Mar 6 04:43:21 CET 2009

Lee Soin wrote:
> Hello, all!
> Can make_ndx generate indices only for heavy atoms or C-alpha atoms in a 
> specified range of residues? And how? Thanks!

Yes.  Type "help" at the make_ndx prompt to see several useful examples of syntax.


> -- 
> SUN Li
> Department of Physics
> Nanjing University, China
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Justin A. Lemkul
Graduate Research Assistant
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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