[gmx-users] problems with gmxtest.pl
Bernhard Bandow
bandow at rrzn.uni-hannover.de
Thu Mar 12 18:34:22 CET 2009
Dear users and developers of gromacs,
although running the tests is straight forward some advice how to
interpret the results would be helpful.
If a test ends with
Testing xyz . . . PASSED but check mdp file differences
and 'diff' of the mdp files shows a differenet file header only
everything seems to be fine. Is this right?
One of the 45 pdb2gmx tests fails. Presumably it is that one which puts
its files into:
pdb2gmx/pdb-6pti/ffencads/none/spc
The potential energies of the other tests in ener.log deviate from those
in reference_s.log. Is there a rule of thumb how small the deviations
should be in order to be tolerable?
Best regards
Bernhard Bandow
--
---------------------------------------------------------------------
Dr. Bernhard Bandow Phone: +49 511 762 794727
Leibniz Universitaet Hannover FAX: +49 511 762 3003
RRZN / HLRN Email: bandow at rrzn.uni-hannover.de
Schlosswender Str. 5
D-30159 Hannover http://www.rrzn.uni-hannover.de/
Germany http://www.hlrn.de/
---------------------------------------------------------------------
More information about the gromacs.org_gmx-users
mailing list