[gmx-users] (no subject)

[Omer Markovitch]

Hello.
What do you mean by "jump"? Perhaps the "connected MN" is a stable state?
If you'll supply more details we could try to help you better.
--Omer.

On Sat, Mar 14, 2009 at 08:15, Homa Azizian <hazizian at razi.tums.ac.ir>wrote:

> My ion jump out of the protein after MD.My ion (MN) has not any covalant
> bond by its neibour, just has electrostatic intraction.
> is there any line that I have to add to the itp file or top file in order
> to
> prevent this problem.
>
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