[gmx-users] How to calculate PMF after AFM pulling

[Justin A. Lemkul]

huifang liu wrote:
> 
> Hello, Justin
>  
> As the mannul said,  it is intended to analyze .pdo files generated by 
> mdrun using
> umbrella sampling tocreate a potential of mean force (PMF). But i were 
> using AFM method not umbrella sampling. How can i do that? Thanks.
>  

http://www.gromacs.org/pipermail/gmx-users/2003-May/005606.html

-Justin

> Huifang
> -- 
> Huifang Liu (Ph.D. Student)
> School of Pharmacy
> Fudan University
> 
> 138 Yi Xue Yuan Rd.          Tel: (86-21)54237419 (O)
> Shanghai, China, 200032     Cell phone: +86-13764669357
> E-mail: huifangliu1985 at gmail.com <mailto:huifangliu1985 at gmail.com> Fax: 
> (86-21)54237264

-- 
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Justin A. Lemkul
Graduate Research Assistant
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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