[gmx-users] trr file in VMD

Paymon Pirzadeh ppirzade at ucalgary.ca
Mon Oct 12 03:32:19 CEST 2009


I did that but, it did not work! I just get a constant color.



On Sun, 2009-10-11 at 18:27 -0700, Amit Choubey wrote:
> yes you can do that by opening the gro file and then loading the .trr
> file .
> 
> amit
> 
> On Sun, Oct 11, 2009 at 6:22 PM, Paymon Pirzadeh
> <ppirzade at ucalgary.ca> wrote:
>         Hello,
>         How can we use the trr file in VMD? I thought since we ask in
>         the mdp
>         file to output the velocities, then in VMD we should be able
>         to see
>         molecules colored based on their velocities through the
>         trajectory
>         options. Am I correct?
>         
>         Payman
>         
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