[gmx-users] How can measure the end-yo end distance of a peptide from the .xtc file

haifeng YUAN yuan at molphys.leidenuniv.nl
Fri Oct 23 17:39:34 CEST 2009

Dear all,
         I would like to get the distance information of the small 
peptide chain from the .xtc file, but the g_mindist seems can only get 
the distance information from one group to another. How I can get the 
end to end distance? I mean  the distance between an end atom  of the 
short chain to the other end atom?
         Thanks in advance.

Haifeng YUAN

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