[gmx-users] help with periodic boundary conditions

Jarol E. Molina hamolina22 at gmail.com
Sat Sep 12 23:36:08 CEST 2009

Hi all

 I am simulating a polymer chain and I need some help. At some simulation
time, the polymer chain is outside the simulation box.

I know that the option “pbc = xyz” into file grom.mdp is sufficient to have
periodic boundary conditions.

 Can you help me


              Jarol E Molina, I.Q., M.S.
Estudiante Doctorado en Ingeniería - Sistemas Energéticos
Universidad Nacional de Colombia - Sede Medellín
jemolina at unal.edu.co
jemolina at unalmed.edu.co
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