[gmx-users] compiling problem

Yang Ye leafyoung at yahoo.com
Thu Sep 17 03:08:20 CEST 2009


Just a work-around, force mpicc to point to cc.
alias mpicc=cc

Yang Ye

On Wed, Sep 16, 2009 at 5:35 PM, Mu Yuguang (Dr) <YGMu at ntu.edu.sg> wrote:

>  No, even I do not use mpi , the error is still there.
>
>
>
> Regards
>
> Yuguang
>
>
>   ------------------------------
>
> *From:* gmx-users-bounces at gromacs.org [mailto:
> gmx-users-bounces at gromacs.org] *On Behalf Of *Yang Ye
> *Sent:* Wednesday, September 16, 2009 2:34 PM
> *To:* Discussion list for GROMACS users
> *Subject:* Re: [gmx-users] compiling problem
>
>
>
> Is LAM-MPI's binary in PATH? if you run mpicc from console, will it also
> show "No such file or directory"? Check LAM-MPI installation.
>
> Regards,
> Yang Ye
>
> On Wed, Sep 16, 2009 at 12:39 PM, Mu Yuguang (Dr) <YGMu at ntu.edu.sg> wrote:
>
> Hi,
> I use
> git clone git://git.gromacs.org/gromacs.git
>
> to get the lastest version
> and
> ./bootstrap
>
> To generate the configure file
> Then use ./configure successfully
>
> Howeve, after make
> The error appears as foloowing:
>
>
> mpicc -DHAVE_CONFIG_H -I. -I. -I../../../../src -I/usr/X11R6/include
> -I/usr/include/libxml2 -I../../../../include
> -DGMXLIBDIR=\"/home/ygmu/software/gmx_cvs/gromacs/share/top\"
> -I/home/ygmu/software/fftw-3.2/float/include -O3 -fomit-frame-pointer
> -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99
> -MT nb_kernel400_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel400_x86_64_sse.Tpo
> -c nb_kernel400_x86_64_sse.c -o nb_kernel400_x86_64_sse.o
> nb_kernel400_x86_64_sse.c: In function `nb_kernel400_x86_64_sse':
> nb_kernel400_x86_64_sse.c:93: warning: implicit declaration of function
> `_mm_castsi128_ps'
> nb_kernel400_x86_64_sse.c:93: error: invalid initializer
> nb_kernel400_x86_64_sse.c:94: error: invalid initializer
> nb_kernel400_x86_64_sse.c:95: error: invalid initializer
> mpicc: No such file or directory
> make[5]: *** [nb_kernel400_x86_64_sse.lo] Error 1
>
> Regards
>
> Yuguang
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>
>
>
> --
> Regards,
> Yang Ye
>
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>



-- 
Regards,
Yang Ye
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