[gmx-users] DSSP=> how to edit .eps file

[Justin A. Lemkul]

Chih-Ying Lin wrote:
> HI
> How to pass an .m2p file to xpm2ps to change the dimensions
> of the plot, data point size, etc. ???

Use the -di flag of xpm2ps.

http://manual.gromacs.org/current/online/m2p.html

-Justin

> 
> Thank you
> 
> Lin
> 
> 
> 
> 
> Chih-Ying Lin wrote:
>>
>>  Hi
>>  With the following two commands,
>>
>>  do_dssp -f 6LYZ-MD.xtc -s 6LYZ-MD.tpr -o secondary-structure.xpm -sc 
> secondary-structure.xvg
>>
>>  xpm2ps -f secondary-structure.xpm -o secondary-structure.eps
>>
>>
>>  With GIMP, i can see the secondary structure plot. The legend indicates
>>  the color of different second structure is shown under the
>>  secondary-structure plot.
>>
>>
>>
>>  One legend is half-shown. The picture of legend is cut.
>>  How can I get that legend full-shown.
>>
> 
> The dimensions of the plot area are likely too small to accommodate the full
> legend.  As I said before, pass an .m2p file to xpm2ps to change the 
> dimensions
> of the plot, data point size, etc.
> 
> -Justin
> 
>>  Thank you
>>  Lin
>>
>>
>>
> 

-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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