[gmx-users] Simulation of only Lipid Bilayer

Arun kumar V arun.target at gmail.com
Tue Apr 6 13:20:23 CEST 2010

Try PRODRG server to build the molecule as well as to get topology file. 
Though  you might have to be careful in using this topology file.


Saumya wrote:
> Hi all,
> Well, I have been trying to make lipid bilayers using genconf of
> gromacs from a single lipid molecule.
> Can anyone tell me how to proceed with the simulation of lipid
> bilayers starting with a single lipid molecule?
> How can I obtain the .pdb file for a lipid?
> Is there any manual that describes the procedure using Gromacs?
> Hoping for some inputs.
> Regards
> Saumya

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