[gmx-users] Fwd: small help

XAvier Periole x.periole at rug.nl
Tue Apr 13 13:15:52 CEST 2010

Dear Satish,

you'll find more help in the mailing list of GROMACS.

regarding the use of g_rmsdist, the option -h is very useful ...
you can access single residues or subpart of a system by using
and index.


Begin forwarded message:

> From: satish kumar ainala <ainalaboss at gmail.com>
> Date: April 13, 2010 12:14:17 PM GMT+02:00
> To: x.periole at rug.nl
> Subject: small help
> Dear sir,
>         I am satish kumar persueing M.Sc Bioinfromatics  from  
> pondicherry university(INDIA).  I have struck with a small command i  
> need ur help to complete this procedure.
>                Syntax for - g_rmsdist   command for a single residue  
> i want an example how to use this command for generating rmsd for a  
> single flexible residue..
>                Plz help me sir in this regard..Thanking You .
> Yours Obediently ,
> Satish kumar

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