[gmx-users] conversion of desmond trajectory files into gromacs

[XAvier Periole]

Well I guess you want to use gmx analysis tools so you'll have to
build the gmx topology of your system when necessary! Often
only a pdb file or a gro file is sufficient.

On Apr 16, 2010, at 5:24 PM, ram bio wrote:

> Thanks Xavier,
>
> Could you make it more eloborate...
>
> Ram
>
> On Fri, Apr 16, 2010 at 4:38 PM, XAvier Periole <x.periole at rug.nl>  
> wrote:
>>
>> VMD reads Desmond trajectories and writes GMX format ...
>> Rests the topology to deal with ...
>>
>> On Apr 16, 2010, at 4:15 PM, ram bio wrote:
>>
>>> Dear All,
>>>
>>> I have run a dynamics of protein ligand complex in lipid bilayer  
>>> dppc
>>> using desmond software and would like to convert the trajectory  
>>> files
>>> files into gromacs format, is it possible?? if so, please let me  
>>> know
>>> your suggestions.
>>>
>>> Thanks,
>>>
>>> Ram
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