[gmx-users] How can I maintain a distance of at least 0.5 nm from each other of solutes

Justin A. Lemkul jalemkul at vt.edu
Sat Apr 17 17:16:04 CEST 2010

rasoul nasiri wrote:
> Dear All,
> Hello
> I understand one can adjust distance of between solvent molecules by 
> genbox command and -vdwd  but I don't know, how do it between the solutes?

Position your solutes using editconf -center, then add solvent.


> Thanks for helping!
> Rasoul


Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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