[gmx-users] simulated annealing
leila karami
karami.leila1 at gmail.com
Wed Apr 21 13:20:09 CEST 2010
Dear Justin
thanks for your attention
I want to use simulated annealing to obtain global minimum for protein-dna
structure. I will do first heating and then slowly cooling.
is my mdp file true, now?
T-couple = brendsen
ref-t = 300
annealing: single
annealing_npoints: 5
annealing_time: 0 3 6 9 12
annealing_temp: 150 650 600 550 500 450 400 350 300
Best regards.
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