[gmx-users] h_bond error

[Justin A. Lemkul]

Maurício Menegatti Rigo wrote:
> Hi,
> 
> I'm trying to compute H bonds in a protein-ligand system. I got the 
> following error:
> 
> ----------------------------------------------------
> Program g_hbond, VERSION 4.0.7
> Source code file: gmx_hbond.c, line: 565
> 
> Fatal error:
> Error in func_type Position Rest.
> ----------------------------------------------------
> 
> I use the line *g_hbond -f file.xtc -s file.tpr -n index.ndx -g 
> HBOND_log -num HBOND*
> 
> /                                    file.xtc = THis is my file with 
> concatenate trajectories./
> 
> 
> I didnt find anywhere about this error. Someone know how to fix it?
> 

Interesting, I answered an identical post exactly one week ago:

http://lists.gromacs.org/pipermail/gmx-users/2010-April/050254.html

There is a work-around in that thread.

-Justin

> Thanks!
> 
> 
> -- 
> Maurício Menegatti Rigo
> Núcleo de Bioinformática do Laboratório de Imunogenética
> Departamento de Genética
> Instituto de Biociências
> Universidade Federal do Rio Grande do Sul
> 

-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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