[gmx-users] angle

Nilesh Dhumal ndhumal at andrew.cmu.edu
Wed Apr 28 23:23:15 CEST 2010

I am doing solvation of glucose. I am trying to calculate a angle between
three selected carbon atoms.
If I run g_angle using angle.ndx file it consider all carbon atom. In
force field C-C-C 112.5 is specified so it’s making a group of all carbon
atoms. I am interested in selected carbon atoms.
How can I plot an angle of selected three carbon atoms?



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