[gmx-users] compressing the system
Moeed
lecielll at googlemail.com
Sun Aug 1 16:45:24 CEST 2010
Hello,
My efforts for compressing a polymer chain all failed. Even when I am
compresing very slowly with tau-p=10 and ref_p of 1 bar simulation crashes
when box size is close to chain size.. I tried different pressures of 1 10
30 and tau_p of 1 2 5 10 and cobination of these...Has anyone idea on
suitable parameters ?
; Pressure coupling
Pcoupl = Parrinello-Rahman
Pcoupltype = semiisotropic
tau_p = 1 1
compressibility = 4.5e-5 4.5e-5 ;
ref_p = 1.0 1.0
Thanks,
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