[gmx-users] compiling GPU 4.5b2, CUDA_INCLUDE_DIRECTORIES function is undefined
rossen.apostolov at cbr.su.se
Mon Aug 9 11:21:22 CEST 2010
The GPU version uses the CUFFT libraries that come with CUDA, and no
external or internal CPU libraries are actually being used. You can
safely ignore the message.
On 8/6/10 9:31 PM, chris.neale at utoronto.ca wrote:
> Thank you Rossen, that worked.
> When I compile, should I be including my FFTW as per normal? I didn't
> do that since it was not mentioned and during the build, I get "--
> Using internal FFT library - fftpack"
> --- original message ---
> Hi Chris,
>> ## what I did:
>> module purge
>> module load gcc/gcc-4.4.0
>> module load cmake/2.8.0 #need version >=2.6.4
>> module load cuda/cuda-3.1
>> mkdir gpuexec
>> cmake /project/pomes/cneale/GPC/exe/intel/gromacs-4.5-beta2/*src*
> Here is the problem - you are passing to CMake the wrong path, it should
> be just /project/pomes/cneale/GPC/exe/intel/gromacs-4.5-beta2/ (rather
> than ...-beta2/*src*)
>> -DGMX_THREADS=OFF -DCMAKE_INSTALL_PREFIX=$(pwd)/gpuexec
>> ## output
>> CMake Error at kernel/gmx_gpu_utils/CMakeLists.txt:18
>> Unknown CMake command "CUDA_INCLUDE_DIRECTORIES".
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