[gmx-users] pdb file

Dallas Warren Dallas.Warren at monash.edu
Mon Aug 9 03:30:26 CEST 2010


This is a VMD issue, it estimates which atoms are bonded together by the
distance that the atoms are separated.  Obviously, the bonds that you
see "disappear" are due to them being separated by a distance larger
than what VMD would say is "bonded".

Catch ya,

Dr. Dallas Warren
Drug Delivery, Disposition and Dynamics
Monash Institute of Pharmaceutical Sciences, Monash University
381 Royal Parade, Parkville VIC 3010
dallas.warren at pharm.monash.edu.au
+61 3 9903 9167
---------------------------------
When the only tool you own is a hammer, every problem begins to resemble
a nail. 


> -----Original Message-----
> From: gmx-users-bounces at gromacs.org [mailto:gmx-users-
> bounces at gromacs.org] On Behalf Of leila karami
> Sent: Friday, 6 August 2010 11:00 PM
> To: gmx-users
> Subject: [gmx-users] pdb file
> 
> Hi gromacs users
> 
> I obtained pdb input file for gromacs from STRAP program. this pdb
> file coantains protein and dna. this pdb file was obtaind form
> superposition of 2 other pdb files. there is one problem: when I see
> pdb file obtained from STRAP program by VMD, some bonds are
> disappeared whereas when I open same file by text editor all things
> are normal.as I can not attached this pdb file, I put residues 10-40
> corresponding to protein from pdb.
> 
> please guide me
> 
> 
> ATOM     95  N   GLY A  10      -1.818  -6.947 -14.722  1.00  0.00
> N
> ATOM     96  CA  GLY A  10      -1.256  -7.638 -13.576  1.00  0.00
> C
> ATOM     97  C   GLY A  10      -2.311  -8.357 -12.758  1.00  0.00
> C
> ATOM     98  O   GLY A  10      -3.368  -7.797 -12.468  1.00  0.00
> O
> ATOM     99  H   GLY A  10      -2.768  -7.530 -14.939  1.00  0.00
> H
> ATOM    100  HA2 GLY A  10      -0.531  -8.359 -13.923  1.00  0.00
> H
> ATOM    101  HA3 GLY A  10      -0.758  -6.916 -12.944  1.00  0.00
> H
> ATOM    102  N   GLN A  11      -2.230  -9.602 -12.388  1.00  0.00
> N
> ATOM    103  CA  GLN A  11      -2.957 -10.399 -11.600  1.00  0.00
> C
> ATOM    104  C   GLN A  11      -2.588 -10.366 -10.121  1.00  0.00
> C
> ATOM    105  O   GLN A  11      -1.978 -11.302  -9.604  1.00  0.00
> O
> ATOM    106  CB  GLN A  11      -2.977 -11.843 -12.104  1.00  0.00
> C
> ATOM    107  CG  GLN A  11      -3.963 -12.790 -13.236  1.00  0.00
> C
> ATOM    108  CD  GLN A  11      -5.336 -11.508 -12.942  1.00  0.00
> C
> ATOM    109  OE1 GLN A  11      -5.869 -11.673 -11.845  1.00  0.00
> O
> ATOM    110  NE2 GLN A  11      -5.918 -10.829 -13.926  1.00  0.00
> N
> ATOM    111  H   GLN A  11      -1.164  -9.991 -12.649  1.00  0.00
> H
> ATOM    112  HA  GLN A  11      -3.941  -9.972 -11.722  1.00  0.00
> H
> ATOM    113  HB2 GLN A  11      -1.990 -12.102 -12.454  1.00  0.00
> H
> ATOM    114  HB3 GLN A  11      -3.242 -12.493 -11.282  1.00  0.00
> H
> ATOM    115  HG2 GLN A  11      -3.582 -11.616 -14.132  1.00  0.00
> H
> ATOM    116  HG3 GLN A  11      -4.590 -13.144 -13.395  1.00  0.00
> H
> ATOM    117 HE21 GLN A  11      -5.434 -10.739 -14.774  1.00  0.00
> H
> ATOM    118 HE22 GLN A  11      -6.805 -10.449 -13.763  1.00  0.00
> H
> ATOM    119  N   VAL A  12      -2.960  -9.284  -9.446  1.00  0.00
> N
> ATOM    120  CA  VAL A  12      -2.670  -9.130  -8.270  1.00  0.00
> C
> ATOM    121  C   VAL A  12      -3.937  -8.829  -7.235  1.00  0.00
> C
> ATOM    122  O   VAL A  12      -4.775  -8.340  -7.664  1.00  0.00
> O
> ATOM    123  CB  VAL A  12      -1.644  -8.800  -7.782  1.00  0.00
> C
> ATOM    124  CG1 VAL A  12      -1.342  -7.874  -6.296  1.00  0.00
> C
> ATOM    125  CG2 VAL A  12      -0.370  -8.270  -8.571  1.00  0.00
> C
> ATOM    126  H   VAL A  12      -3.444  -8.572  -9.914  1.00  0.00
> H
> ATOM    127  HA  VAL A  12      -2.246 -10.600  -7.670  1.00  0.00
> H
> ATOM    128  HB  VAL A  12      -2.710  -7.780  -8.126  1.00  0.00
> H
> ATOM    129 HG11 VAL A  12      -2.268  -7.887  -5.739  1.00  0.00
> H
> ATOM    130 HG12 VAL A  12      -0.718  -8.697  -5.980  1.00  0.00
> H
> ATOM    131 HG13 VAL A  12      -0.828  -6.941  -6.117  1.00  0.00
> H
> ATOM    132 HG21 VAL A  12       0.203  -9.430  -8.830  1.00  0.00
> H
> ATOM    133 HG22 VAL A  12      -0.625  -8.588  -9.572  1.00  0.00
> H
> ATOM    134 HG23 VAL A  12       0.215  -7.363  -8.621  1.00  0.00
> H
> ATOM    135  N   ARG A  13      -4.710  -9.465  -6.760  1.00  0.00
> N
> ATOM    136  CA  ARG A  13      -5.236  -9.265  -5.223  1.00  0.00
> C
> ATOM    137  C   ARG A  13      -5.140  -9.881  -3.845  1.00  0.00
> C
> ATOM    138  O   ARG A  13      -4.412 -10.947  -3.720  1.00  0.00
> O
> ATOM    139  CB  ARG A  13      -6.480  -9.873  -5.874  1.00  0.00
> C
> ATOM    140  CG  ARG A  13      -7.779  -9.475  -5.194  1.00  0.00
> C
> ATOM    141  CD  ARG A  13      -8.147 -10.444  -4.830  1.00  0.00
> C
> ATOM    142  NE  ARG A  13      -8.819 -11.635  -4.596  1.00  0.00
> N
> ATOM    143  CZ  ARG A  13     -10.800 -11.611  -5.186  1.00  0.00
> C
> ATOM    144  NH1 ARG A  13     -10.654 -10.463  -5.337  1.00  0.00
> N
> ATOM    145  NH2 ARG A  13     -10.555 -12.737  -5.628  1.00  0.00
> N
> ATOM    146  H   ARG A  13      -3.368 -10.860  -5.788  1.00  0.00
> H
> ATOM    147  HA  ARG A  13      -5.385  -8.201  -5.110  1.00  0.00
> H
> ATOM    148  HB2 ARG A  13      -6.526  -9.555  -6.904  1.00  0.00
> H
> ATOM    149  HB3 ARG A  13      -6.397 -10.949  -5.841  1.00  0.00
> H
> ATOM    150  HG2 ARG A  13      -7.665  -8.487  -4.770  1.00  0.00
> H
> ATOM    151  HG3 ARG A  13      -8.571  -9.465  -5.928  1.00  0.00
> H
> ATOM    152  HD2 ARG A  13      -7.245 -10.744  -3.571  1.00  0.00
> H
> ATOM    153  HD3 ARG A  13      -8.805  -9.942  -3.388  1.00  0.00
> H
> ATOM    154  HE  ARG A  13      -8.359 -12.494  -4.493  1.00  0.00
> H
> ATOM    155 HH11 ARG A  13     -10.244  -9.612  -5.700  1.00  0.00
> H
> ATOM    156 HH12 ARG A  13     -11.548 -10.447  -5.784  1.00  0.00
> H
> ATOM    157 HH21 ARG A  13     -10.710 -13.604  -5.514  1.00  0.00
> H
> ATOM    158 HH22 ARG A  13     -11.449 -12.718  -6.720  1.00  0.00
> H
> ATOM    159  N   PHE A  14      -5.506  -9.204  -2.814  1.00  0.00
> N
> ATOM    160  CA  PHE A  14      -5.361  -9.684  -1.444  1.00  0.00
> C
> ATOM    161  C   PHE A  14      -6.629  -9.416  -0.638  1.00  0.00
> C
> ATOM    162  O   PHE A  14      -7.910  -8.279  -0.546  1.00  0.00
> O
> ATOM    163  CB  PHE A  14      -4.163  -9.120  -0.770  1.00  0.00
> C
> ATOM    164  CG  PHE A  14      -2.845  -9.366  -1.399  1.00  0.00
> C
> ATOM    165  CD1 PHE A  14      -2.352  -8.633  -2.466  1.00  0.00
> C
> ATOM    166  CD2 PHE A  14      -2.101 -10.434  -0.922  1.00  0.00
> C
> ATOM    167  CE1 PHE A  14      -1.139  -8.956  -3.460  1.00  0.00
> C
> ATOM    168  CE2 PHE A  14      -0.888 -10.762  -1.499  1.00  0.00
> C
> ATOM    169  CZ  PHE A  14      -0.407 -10.220  -2.562  1.00  0.00
> C
> ATOM    170  H   PHE A  14      -5.978  -8.359  -2.977  1.00  0.00
> H
> ATOM    171  HA  PHE A  14      -5.191 -10.748  -1.483  1.00  0.00
> H
> ATOM    172  HB2 PHE A  14      -4.280  -7.940  -0.828  1.00  0.00
> H
> ATOM    173  HB3 PHE A  14      -4.129  -9.312   0.266  1.00  0.00
> H
> ATOM    174  HD1 PHE A  14      -2.926  -7.798  -2.845  1.00  0.00
> H
> ATOM    175  HD2 PHE A  14      -2.474 -11.130  -0.920  1.00  0.00
> H
> ATOM    176  HE1 PHE A  14      -0.768  -8.376  -3.878  1.00  0.00
> H
> ATOM    177  HE2 PHE A  14      -0.317 -11.595  -1.120  1.00  0.00
> H
> ATOM    178  HZ  PHE A  14       0.540 -10.277  -3.150  1.00  0.00
> H
> ATOM    179  N   SER A  15      -7.184 -10.473  -0.540  1.00  0.00
> N
> ATOM    180  CA  SER A  15      -8.402 -10.355   0.740  1.00  0.00
> C
> ATOM    181  C   SER A  15      -8.269  -9.239   1.773  1.00  0.00
> C
> ATOM    182  O   SER A  15      -7.164  -8.798   2.880  1.00  0.00
> O
> ATOM    183  CB  SER A  15      -8.708 -11.680   1.442  1.00  0.00
> C
> ATOM    184  OG  SER A  15     -10.980 -11.824   1.675  1.00  0.00
> O
> ATOM    185  H   SER A  15      -6.769 -11.354  -0.166  1.00  0.00
> H
> ATOM    186  HA  SER A  15      -9.213 -10.116   0.710  1.00  0.00
> H
> ATOM    187  HB2 SER A  15      -8.373 -12.499   0.822  1.00  0.00
> H
> ATOM    188  HB3 SER A  15      -8.189 -11.711   2.388  1.00  0.00
> H
> ATOM    189  HG  SER A  15     -10.276 -11.739   2.615  1.00  0.00
> H
> ATOM    190  N   ASN A  16      -9.404  -8.788   2.296  1.00  0.00
> N
> ATOM    191  CA  ASN A  16      -9.416  -7.723   3.292  1.00  0.00
> C
> ATOM    192  C   ASN A  16      -8.428  -8.200   4.416  1.00  0.00
> C
> ATOM    193  O   ASN A  16      -7.487  -7.260   4.646  1.00  0.00
> O
> ATOM    194  CB  ASN A  16     -10.824  -7.551   3.867  1.00  0.00
> C
> ATOM    195  CG  ASN A  16     -10.822  -6.795   5.180  1.00  0.00
> C
> ATOM    196  OD1 ASN A  16     -10.442  -7.334   6.219  1.00  0.00
> O
> ATOM    197  ND2 ASN A  16     -11.250  -5.538   5.140  1.00  0.00
> N
> ATOM    198  H   ASN A  16     -10.253  -9.180   2.500  1.00  0.00
> H
> ATOM    199  HA  ASN A  16      -9.121  -6.808   2.802  1.00  0.00
> H
> ATOM    200  HB2 ASN A  16     -11.430  -7.200   3.158  1.00  0.00
> H
> ATOM    201  HB3 ASN A  16     -11.262  -8.524   4.320  1.00  0.00
> H
> ATOM    202 HD21 ASN A  16     -11.538  -5.173   4.277  1.00  0.00
> H
> ATOM    203 HD22 ASN A  16     -11.260  -5.260   5.975  1.00  0.00
> H
> ATOM    204  N   ASP A  17      -8.649  -9.128   5.113  1.00  0.00
> N
> ATOM    205  CA  ASP A  17      -7.778  -9.527   6.212  1.00  0.00
> C
> ATOM    206  C   ASP A  17      -6.354  -9.760   5.721  1.00  0.00
> C
> ATOM    207  O   ASP A  17      -5.394  -9.267   6.311  1.00  0.00
> O
> ATOM    208  CB  ASP A  17      -8.314 -10.793   6.882  1.00  0.00
> C
> ATOM    209  CG  ASP A  17      -9.409 -10.498   7.888  1.00  0.00
> C
> ATOM    210  OD1 ASP A  17      -9.166  -9.694   8.812  1.00  0.00
> O
> ATOM    211  OD2 ASP A  17     -10.510 -11.690   7.750  1.00  0.00
> O
> ATOM    212  H   ASP A  17      -9.416  -9.694   4.881  1.00  0.00
> H
> ATOM    213  HA  ASP A  17      -7.769  -8.725   6.935  1.00  0.00
> H
> ATOM    214  HB2 ASP A  17      -8.713 -11.451   6.125  1.00  0.00
> H
> ATOM    215  HB3 ASP A  17      -7.504 -11.291   7.395  1.00  0.00
> H
> ATOM    216  N   GLN A  18      -6.224 -10.517   4.635  1.00  0.00
> N
> ATOM    217  CA  GLN A  18      -4.916 -10.817   4.650  1.00  0.00
> C
> ATOM    218  C   GLN A  18      -4.470  -9.564   4.600  1.00  0.00
> C
> ATOM    219  O   GLN A  18      -2.973  -9.513   4.605  1.00  0.00
> O
> ATOM    220  CB  GLN A  18      -5.720 -11.411   2.664  1.00  0.00
> C
> ATOM    221  CG  GLN A  18      -5.251 -12.920   2.658  1.00  0.00
> C
> ATOM    222  CD  GLN A  18      -5.576 -13.465   1.282  1.00  0.00
> C
> ATOM    223  OE1 GLN A  18      -5.567 -12.730   0.293  1.00  0.00
> O
> ATOM    224  NE2 GLN A  18      -5.863 -14.760   1.210  1.00  0.00
> N
> ATOM    225  H   GLN A  18      -7.260 -10.881   4.209  1.00  0.00
> H
> ATOM    226  HA  GLN A  18      -4.435 -11.543   4.703  1.00  0.00
> H
> ATOM    227  HB2 GLN A  18      -5.934 -10.965   2.190  1.00  0.00
> H
> ATOM    228  HB3 GLN A  18      -4.190 -11.173   2.850  1.00  0.00
> H
> ATOM    229  HG2 GLN A  18      -4.337 -13.381   3.500  1.00  0.00
> H
> ATOM    230  HG3 GLN A  18      -6.590 -13.176   3.331  1.00  0.00
> H
> ATOM    231 HE21 GLN A  18      -5.852 -15.282   2.390  1.00  0.00
> H
> ATOM    232 HE22 GLN A  18      -6.780 -15.138   0.333  1.00  0.00
> H
> ATOM    233  N   THR A  19      -4.519  -8.557   3.279  1.00  0.00
> N
> ATOM    234  CA  THR A  19      -3.786  -7.306   3.141  1.00  0.00
> C
> ATOM    235  C   THR A  19      -3.420  -6.729   4.504  1.00  0.00
> C
> ATOM    236  O   THR A  19      -2.276  -6.335   4.735  1.00  0.00
> O
> ATOM    237  CB  THR A  19      -4.600  -6.261   2.355  1.00  0.00
> C
> ATOM    238  OG1 THR A  19      -4.914  -6.763   1.520  1.00  0.00
> O
> ATOM    239  CG2 THR A  19      -3.828  -4.955   2.230  1.00  0.00
> C
> ATOM    240  H   THR A  19      -5.381  -8.659   2.825  1.00  0.00
> H
> ATOM    241  HA  THR A  19      -2.878  -7.510   2.592  1.00  0.00
> H
> ATOM    242  HB  THR A  19      -5.519  -6.670   2.889  1.00  0.00
> H
> ATOM    243  HG1 THR A  19      -5.120  -7.717   1.900  1.00  0.00
> H
> ATOM    244 HG21 THR A  19      -3.194  -4.995   1.356  1.00  0.00
> H
> ATOM    245 HG22 THR A  19      -3.222  -4.810   3.111  1.00  0.00
> H
> ATOM    246 HG23 THR A  19      -4.524  -4.135   2.131  1.00  0.00
> H
> ATOM    247  N   ILE A  20      -4.396  -6.682   5.402  1.00  0.00
> N
> ATOM    248  CA  ILE A  20      -4.176  -6.155   6.743  1.00  0.00
> C
> ATOM    249  C   ILE A  20      -2.922  -6.756   7.370  1.00  0.00
> C
> ATOM    250  O   ILE A  20      -1.944  -6.530   7.619  1.00  0.00
> O
> ATOM    251  CB  ILE A  20      -5.380  -6.432   7.663  1.00  0.00
> C
> ATOM    252  CG1 ILE A  20      -6.610  -5.663   7.175  1.00  0.00
> C
> ATOM    253  CG2 ILE A  20      -5.470  -6.530   9.980  1.00  0.00
> C
> ATOM    254  CD1 ILE A  20      -7.909  -6.165   7.763  1.00  0.00
> C
> ATOM    255  H   ILE A  20      -5.287  -7.110   5.158  1.00  0.00
> H
> ATOM    256  HA  ILE A  20      -4.470  -5.850   6.664  1.00  0.00
> H
> ATOM    257  HB  ILE A  20      -5.591  -7.489   7.633  1.00  0.00
> H
> ATOM    258 HG12 ILE A  20      -6.506  -4.623   7.441  1.00  0.00
> H
> ATOM    259 HG13 ILE A  20      -6.675  -5.750   6.990  1.00  0.00
> H
> ATOM    260 HG21 ILE A  20      -4.118  -6.519   9.387  1.00  0.00
> H
> ATOM    261 HG22 ILE A  20      -4.952  -4.981   9.175  1.00  0.00
> H
> ATOM    262 HG23 ILE A  20      -5.837  -6.393   9.751  1.00  0.00
> H
> ATOM    263 HD11 ILE A  20      -8.454  -6.718   7.120  1.00  0.00
> H
> ATOM    264 HD12 ILE A  20      -7.699  -6.808   8.604  1.00  0.00
> H
> ATOM    265 HD13 ILE A  20      -8.505  -5.324   8.900  1.00  0.00
> H
> ATOM    266  N   GLU A  21      -2.960  -8.620   7.622  1.00  0.00
> N
> ATOM    267  CA  GLU A  21      -1.828  -8.758   8.220  1.00  0.00
> C
> ATOM    268  C   GLU A  21      -0.555  -8.522   7.408  1.00  0.00
> C
> ATOM    269  O   GLU A  21       0.458  -8.710   7.941  1.00  0.00
> O
> ATOM    270  CB  GLU A  21      -2.114 -10.258   8.314  1.00  0.00
> C
> ATOM    271  CG  GLU A  21      -3.620 -10.625   9.444  1.00  0.00
> C
> ATOM    272  CD  GLU A  21      -2.835 -12.320   9.961  1.00  0.00
> C
> ATOM    273  OE1 GLU A  21      -1.673 -12.375  10.260  1.00  0.00
> O
> ATOM    274  OE2 GLU A  21      -3.822 -12.791  10.640  1.00  0.00
> O
> ATOM    275  H   GLU A  21      -3.770  -8.567   7.401  1.00  0.00
> H
> ATOM    276  HA  GLU A  21      -1.684  -8.364   9.213  1.00  0.00
> H
> ATOM    277  HB2 GLU A  21      -2.549 -10.588   7.383  1.00  0.00
> H
> ATOM    278  HB3 GLU A  21      -1.182 -10.779   8.470  1.00  0.00
> H
> ATOM    279  HG2 GLU A  21      -2.917  -9.932  10.258  1.00  0.00
> H
> ATOM    280  HG3 GLU A  21      -4.780 -10.548   9.830  1.00  0.00
> H
> ATOM    281  N   LEU A  22      -0.619  -8.831   6.118  1.00  0.00
> N
> ATOM    282  CA  LEU A  22       0.527  -8.654   5.232  1.00  0.00
> C
> ATOM    283  C   LEU A  22       1.302  -7.390   5.592  1.00  0.00
> C
> ATOM    284  O   LEU A  22       2.532  -7.373   5.550  1.00  0.00
> O
> ATOM    285  CB  LEU A  22       0.640  -8.586   3.776  1.00  0.00
> C
> ATOM    286  CG  LEU A  22      -0.261  -9.925   3.112  1.00  0.00
> C
> ATOM    287  CD1 LEU A  22      -1.700  -9.708   1.843  1.00  0.00
> C
> ATOM    288  CD2 LEU A  22       1.160 -10.694   2.808  1.00  0.00
> C
> ATOM    289  H   LEU A  22      -1.453  -9.187   5.751  1.00  0.00
> H
> ATOM    290  HA  LEU A  22       1.177  -9.508   5.357  1.00  0.00
> H
> ATOM    291  HB2 LEU A  22      -0.823  -7.974   3.738  1.00  0.00
> H
> ATOM    292  HB3 LEU A  22       0.850  -8.114   3.203  1.00  0.00
> H
> ATOM    293  HG  LEU A  22      -0.856 -10.520   3.792  1.00  0.00
> H
> ATOM    294 HD11 LEU A  22      -0.754  -8.793   1.366  1.00  0.00
> H
> ATOM    295 HD12 LEU A  22      -2.118  -9.640   2.940  1.00  0.00
> H
> ATOM    296 HD13 LEU A  22      -0.913 -10.538   1.171  1.00  0.00
> H
> ATOM    297 HD21 LEU A  22       0.970 -11.810   1.800  1.00  0.00
> H
> ATOM    298 HD22 LEU A  22       1.118 -11.513   3.505  1.00  0.00
> H
> ATOM    299 HD23 LEU A  22       1.865 -10.340   2.901  1.00  0.00
> H
> ATOM    300  N   GLU A  23       0.574  -6.335   5.946  1.00  0.00
> N
> ATOM    301  CA  GLU A  23       1.195  -5.680   6.314  1.00  0.00
> C
> ATOM    302  C   GLU A  23       1.865  -5.166   7.680  1.00  0.00
> C
> ATOM    303  O   GLU A  23       3.790  -5.700   7.802  1.00  0.00
> O
> ATOM    304  CB  GLU A  23       0.152  -3.948   6.323  1.00  0.00
> C
> ATOM    305  CG  GLU A  23      -0.460  -3.676   4.960  1.00  0.00
> C
> ATOM    306  CD  GLU A  23      -0.952  -2.247   4.817  1.00  0.00
> C
> ATOM    307  OE1 GLU A  23      -1.677  -1.777   5.721  1.00  0.00
> O
> ATOM    308  OE2 GLU A  23      -0.615  -1.601   3.805  1.00  0.00
> O
> ATOM    309  H   GLU A  23      -0.402  -6.412   5.960  1.00  0.00
> H
> ATOM    310  HA  GLU A  23       1.947  -4.841   5.572  1.00  0.00
> H
> ATOM    311  HB2 GLU A  23      -0.641  -4.217   7.600  1.00  0.00
> H
> ATOM    312  HB3 GLU A  23       0.621  -3.400   6.672  1.00  0.00
> H
> ATOM    313  HG2 GLU A  23       0.284  -3.861   4.202  1.00  0.00
> H
> ATOM    314  HG3 GLU A  23      -1.296  -4.344   4.815  1.00  0.00
> H
> ATOM    315  N   LYS A  24       1.640  -5.430   8.708  1.00  0.00
> N
> ATOM    316  CA  LYS A  24       1.578  -5.552  10.670  1.00  0.00
> C
> ATOM    317  C   LYS A  24       2.895  -6.319  10.850  1.00  0.00
> C
> ATOM    318  O   LYS A  24       3.710  -6.153  10.994  1.00  0.00
> O
> ATOM    319  CB  LYS A  24       0.552  -6.256  10.960  1.00  0.00
> C
> ATOM    320  CG  LYS A  24      -0.756  -5.500  11.950  1.00  0.00
> C
> ATOM    321  CD  LYS A  24      -1.701  -6.192  12.620  1.00  0.00
> C
> ATOM    322  CE  LYS A  24      -2.650  -5.202  12.722  1.00  0.00
> C
> ATOM    323  NZ  LYS A  24      -3.881  -4.989  11.911  1.00  0.00
> N
> ATOM    324  H   LYS A  24       0.104  -5.546   8.548  1.00  0.00
> H
> ATOM    325  HA  LYS A  24       1.749  -4.555  10.446  1.00  0.00
> H
> ATOM    326  HB2 LYS A  24       0.342  -7.230  10.545  1.00  0.00
> H
> ATOM    327  HB3 LYS A  24       0.977  -6.378  11.947  1.00  0.00
> H
> ATOM    328  HG2 LYS A  24      -0.551  -4.505  11.460  1.00  0.00
> H
> ATOM    329  HG3 LYS A  24      -1.230  -5.440  10.126  1.00  0.00
> H
> ATOM    330  HD2 LYS A  24      -2.283  -6.925  11.524  1.00  0.00
> H
> ATOM    331  HD3 LYS A  24      -1.121  -6.685  12.829  1.00  0.00
> H
> ATOM    332  HE2 LYS A  24      -2.928  -5.580  13.692  1.00  0.00
> H
> ATOM    333  HE3 LYS A  24      -2.138  -4.257  12.836  1.00  0.00
> H
> ATOM    334  HZ1 LYS A  24      -4.725  -5.171  12.492  1.00  0.00
> H
> ATOM    335  HZ2 LYS A  24      -3.889  -5.638  11.970  1.00  0.00
> H
> ATOM    336  HZ3 LYS A  24      -3.915  -4.110  11.562  1.00  0.00
> H
> ATOM    337  N   LYS A  25       3.101  -7.156   9.740  1.00  0.00
> N
> ATOM    338  CA  LYS A  25       4.322  -7.946   8.970  1.00  0.00
> C
> ATOM    339  C   LYS A  25       5.463  -7.111   8.399  1.00  0.00
> C
> ATOM    340  O   LYS A  25       6.493  -6.921   9.480  1.00  0.00
> O
> ATOM    341  CB  LYS A  25       4.850  -9.175   8.920  1.00  0.00
> C
> ATOM    342  CG  LYS A  25       5.136 -10.258   8.265  1.00  0.00
> C
> ATOM    343  CD  LYS A  25       5.184 -10.767   9.696  1.00  0.00
> C
> ATOM    344  CE  LYS A  25       5.946 -12.790   9.796  1.00  0.00
> C
> ATOM    345  NZ  LYS A  25       5.669 -12.784  11.790  1.00  0.00
> N
> ATOM    346  H   LYS A  25       2.415  -7.243   8.378  1.00  0.00
> H
> ATOM    347  HA  LYS A  25       4.592  -8.270   9.965  1.00  0.00
> H
> ATOM    348  HB2 LYS A  25       3.121  -9.597   8.335  1.00  0.00
> H
> ATOM    349  HB3 LYS A  25       4.830  -8.868   7.560  1.00  0.00
> H
> ATOM    350  HG2 LYS A  25       4.901 -11.830   7.609  1.00  0.00
> H
> ATOM    351  HG3 LYS A  25       6.104  -9.854   8.300  1.00  0.00
> H
> ATOM    352  HD2 LYS A  25       5.675 -10.290  10.314  1.00  0.00
> H
> ATOM    353  HD3 LYS A  25       4.173 -10.918  10.480  1.00  0.00
> H
> ATOM    354  HE2 LYS A  25       5.651 -12.715   8.975  1.00  0.00
> H
> ATOM    355  HE3 LYS A  25       7.400 -11.871   9.730  1.00  0.00
> H
> ATOM    356  HZ1 LYS A  25       6.105 -12.270  11.869  1.00  0.00
> H
> ATOM    357  HZ2 LYS A  25       6.590 -13.748  11.480  1.00  0.00
> H
> ATOM    358  HZ3 LYS A  25       4.643 -12.843  11.239  1.00  0.00
> H
> ATOM    359  N   PHE A  26       5.276  -6.616   7.180  1.00  0.00
> N
> ATOM    360  CA  PHE A  26       6.290  -5.801   6.522  1.00  0.00
> C
> ATOM    361  C   PHE A  26       6.831  -4.735   7.469  1.00  0.00
> C
> ATOM    362  O   PHE A  26       8.100  -4.357   7.394  1.00  0.00
> O
> ATOM    363  CB  PHE A  26       5.710  -5.139   5.269  1.00  0.00
> C
> ATOM    364  CG  PHE A  26       6.532  -3.988   4.764  1.00  0.00
> C
> ATOM    365  CD1 PHE A  26       6.343  -2.711   5.268  1.00  0.00
> C
> ATOM    366  CD2 PHE A  26       7.493  -4.184   3.786  1.00  0.00
> C
> ATOM    367  CE1 PHE A  26       7.980  -1.651   4.802  1.00  0.00
> C
> ATOM    368  CE2 PHE A  26       8.251  -3.128   3.319  1.00  0.00
> C
> ATOM    369  CZ  PHE A  26       8.550  -1.860   3.828  1.00  0.00
> C
> ATOM    370  H   PHE A  26       4.434  -6.802   6.713  1.00  0.00
> H
> ATOM    371  HA  PHE A  26       7.100  -6.453   6.232  1.00  0.00
> H
> ATOM    372  HB2 PHE A  26       5.646  -5.874   4.480  1.00  0.00
> H
> ATOM    373  HB3 PHE A  26       4.721  -4.770   5.493  1.00  0.00
> H
> ATOM    374  HD1 PHE A  26       5.597  -2.547   6.310  1.00  0.00
> H
> ATOM    375  HD2 PHE A  26       7.650  -5.177   3.387  1.00  0.00
> H
> ATOM    376  HE1 PHE A  26       6.941  -0.661   5.203  1.00  0.00
> H
> ATOM    377  HE2 PHE A  26       8.998  -3.295   2.555  1.00  0.00
> H
> ATOM    378  HZ  PHE A  26       8.645  -1.320   3.463  1.00  0.00
> H
> ATOM    379  N   GLU A  27       5.970  -4.251   8.362  1.00  0.00
> N
> ATOM    380  CA  GLU A  27       6.361  -3.227   9.322  1.00  0.00
> C
> ATOM    381  C   GLU A  27       7.430  -3.756  10.276  1.00  0.00
> C
> ATOM    382  O   GLU A  27       8.467  -3.119  10.479  1.00  0.00
> O
> ATOM    383  CB  GLU A  27       5.144  -2.753  10.119  1.00  0.00
> C
> ATOM    384  CG  GLU A  27       3.954  -2.384   9.248  1.00  0.00
> C
> ATOM    385  CD  GLU A  27       4.370  -0.964   8.718  1.00  0.00
> C
> ATOM    386  OE1 GLU A  27       4.697  -0.127   9.366  1.00  0.00
> O
> ATOM    387  OE2 GLU A  27       3.440  -0.694   7.656  1.00  0.00
> O
> ATOM    388  H   GLU A  27       5.520  -4.592   8.371  1.00  0.00
> H
> ATOM    389  HA  GLU A  27       6.768  -2.394   8.772  1.00  0.00
> H
> ATOM    390  HB2 GLU A  27       4.841  -3.539  10.793  1.00  0.00
> H
> ATOM    391  HB3 GLU A  27       5.425  -1.884  10.696  1.00  0.00
> H
> ATOM    392  HG2 GLU A  27       3.914  -3.620   8.409  1.00  0.00
> H
> ATOM    393  HG3 GLU A  27       3.520  -2.481   9.833  1.00  0.00
> H
> ATOM    394  N   THR A  28       7.173  -4.922  10.857  1.00  0.00
> N
> ATOM    395  CA  THR A  28       8.111  -5.536  11.788  1.00  0.00
> C
> ATOM    396  C   THR A  28       9.331  -6.860  11.590  1.00  0.00
> C
> ATOM    397  O   THR A  28      10.402  -6.235  11.647  1.00  0.00
> O
> ATOM    398  CB  THR A  28       7.447  -6.673  12.586  1.00  0.00
> C
> ATOM    399  OG1 THR A  28       6.815  -7.596  11.692  1.00  0.00
> O
> ATOM    400  CG2 THR A  28       6.420  -6.123  13.564  1.00  0.00
> C
> ATOM    401  H   THR A  28       6.331  -5.381  10.654  1.00  0.00
> H
> ATOM    402  HA  THR A  28       8.434  -4.776  12.486  1.00  0.00
> H
> ATOM    403  HB  THR A  28       8.211  -7.195  13.145  1.00  0.00
> H
> ATOM    404  HG1 THR A  28       7.451  -8.258  11.413  1.00  0.00
> H
> ATOM    405 HG21 THR A  28       5.737  -6.908  13.850  1.00  0.00
> H
> ATOM    406 HG22 THR A  28       5.869  -5.322  13.930  1.00  0.00
> H
> ATOM    407 HG23 THR A  28       6.925  -5.746  14.441  1.00  0.00
> H
> ATOM    408  N   GLN A  29       9.161  -6.387   9.776  1.00  0.00
> N
> ATOM    409  CA  GLN A  29      10.250  -6.921   8.965  1.00  0.00
> C
> ATOM    410  C   GLN A  29       9.998  -6.671   7.482  1.00  0.00
> C
> ATOM    411  O   GLN A  29       9.830  -7.244   6.893  1.00  0.00
> O
> ATOM    412  CB  GLN A  29      10.416  -8.420   9.222  1.00  0.00
> C
> ATOM    413  CG  GLN A  29      11.845  -8.911   9.500  1.00  0.00
> C
> ATOM    414  CD  GLN A  29      11.934 -10.421   8.956  1.00  0.00
> C
> ATOM    415  OE1 GLN A  29      11.190 -11.142   9.621  1.00  0.00
> O
> ATOM    416  NE2 GLN A  29      12.850 -10.909   8.128  1.00  0.00
> N
> ATOM    417  H   GLN A  29       8.284  -6.245   9.364  1.00  0.00
> H
> ATOM    418  HA  GLN A  29      11.157  -6.413   9.255  1.00  0.00
> H
> ATOM    419  HB2 GLN A  29      10.102  -8.637  10.232  1.00  0.00
> H
> ATOM    420  HB3 GLN A  29       9.786  -8.963   8.534  1.00  0.00
> H
> ATOM    421  HG2 GLN A  29      12.253  -8.486   8.147  1.00  0.00
> H
> ATOM    422  HG3 GLN A  29      12.428  -8.581   9.897  1.00  0.00
> H
> ATOM    423 HE21 GLN A  29      13.409 -10.276   7.631  1.00  0.00
> H
> ATOM    424 HE22 GLN A  29      12.930 -11.883   8.480  1.00  0.00
> H
> ATOM    425  N   LYS A  30      10.817  -5.813   6.885  1.00  0.00
> N
> ATOM    426  CA  LYS A  30      10.685  -5.487   5.469  1.00  0.00
> C
> ATOM    427  C   LYS A  30      10.743  -6.749   4.613  1.00  0.00
> C
> ATOM    428  O   LYS A  30      10.140  -6.812   3.542  1.00  0.00
> O
> ATOM    429  CB  LYS A  30      11.788  -4.518   5.430  1.00  0.00
> C
> ATOM    430  CG  LYS A  30      11.829  -3.243   5.867  1.00  0.00
> C
> ATOM    431  CD  LYS A  30      10.746  -2.266   5.439  1.00  0.00
> C
> ATOM    432  CE  LYS A  30      10.347  -1.342   6.579  1.00  0.00
> C
> ATOM    433  NZ  LYS A  30       9.569  -2.590   7.628  1.00  0.00
> N
> ATOM    434  H   LYS A  30      11.529  -5.388   7.408  1.00  0.00
> H
> ATOM    435  HA  LYS A  30       9.725  -5.130   5.327  1.00  0.00
> H
> ATOM    436  HB2 LYS A  30      12.743  -5.130   5.137  1.00  0.00
> H
> ATOM    437  HB3 LYS A  30      11.633  -4.248   4.700  1.00  0.00
> H
> ATOM    438  HG2 LYS A  30      11.684  -3.492   6.907  1.00  0.00
> H
> ATOM    439  HG3 LYS A  30      12.795  -2.773   5.738  1.00  0.00
> H
> ATOM    440  HD2 LYS A  30      11.116  -1.669   4.618  1.00  0.00
> H
> ATOM    441  HD3 LYS A  30       9.878  -2.825   5.118  1.00  0.00
> H
> ATOM    442  HE2 LYS A  30      11.241  -0.932   7.240  1.00  0.00
> H
> ATOM    443  HE3 LYS A  30       9.743  -0.541   6.180  1.00  0.00
> H
> ATOM    444  HZ1 LYS A  30       8.550  -1.940   7.461  1.00  0.00
> H
> ATOM    445  HZ2 LYS A  30       9.803  -1.680   8.567  1.00  0.00
> H
> ATOM    446  HZ3 LYS A  30       9.795  -3.750   7.610  1.00  0.00
> H
> ATOM    447  N   TYR A  31      11.470  -7.750   5.930  1.00  0.00
> N
> ATOM    448  CA  TYR A  31      11.607  -9.100   4.372  1.00  0.00
> C
> ATOM    449  C   TYR A  31      11.289 -10.196   5.278  1.00  0.00
> C
> ATOM    450  O   TYR A  31      11.620 -10.310   6.479  1.00  0.00
> O
> ATOM    451  CB  TYR A  31      13.220  -9.149   3.809  1.00  0.00
> C
> ATOM    452  CG  TYR A  31      13.295  -8.251   2.624  1.00  0.00
> C
> ATOM    453  CD1 TYR A  31      13.447  -6.880   2.786  1.00  0.00
> C
> ATOM    454  CD2 TYR A  31      13.397  -8.774   1.341  1.00  0.00
> C
> ATOM    455  CE1 TYR A  31      13.694  -6.560   1.704  1.00  0.00
> C
> ATOM    456  CE2 TYR A  31      13.647  -7.959   0.254  1.00  0.00
> C
> ATOM    457  CZ  TYR A  31      13.793  -6.599   0.442  1.00  0.00
> C
> ATOM    458  OH  TYR A  31      14.410  -5.782  -0.637  1.00  0.00
> O
> ATOM    459  H   TYR A  31      11.927  -7.642   5.953  1.00  0.00
> H
> ATOM    460  HA  TYR A  31      10.904  -9.100   3.552  1.00  0.00
> H
> ATOM    461  HB2 TYR A  31      13.736  -8.902   4.581  1.00  0.00
> H
> ATOM    462  HB3 TYR A  31      13.180 -10.170   3.496  1.00  0.00
> H
> ATOM    463  HD1 TYR A  31      13.369  -6.456   3.777  1.00  0.00
> H
> ATOM    464  HD2 TYR A  31      13.282  -9.840   1.197  1.00  0.00
> H
> ATOM    465  HE1 TYR A  31      13.809  -4.992   1.851  1.00  0.00
> H
> ATOM    466  HE2 TYR A  31      13.723  -8.383  -0.735  1.00  0.00
> H
> ATOM    467  HH  TYR A  31      13.836  -6.254  -1.449  1.00  0.00
> H
> ATOM    468  N   LEU A  32      11.277 -11.390   4.697  1.00  0.00
> N
> ATOM    469  CA  LEU A  32      10.987 -12.604   5.452  1.00  0.00
> C
> ATOM    470  C   LEU A  32      11.680 -13.812   4.826  1.00  0.00
> C
> ATOM    471  O   LEU A  32      11.489 -14.105   3.644  1.00  0.00
> O
> ATOM    472  CB  LEU A  32       9.477 -12.843   5.513  1.00  0.00
> C
> ATOM    473  CG  LEU A  32       8.647 -11.725   6.144  1.00  0.00
> C
> ATOM    474  CD1 LEU A  32       7.204 -11.800   5.670  1.00  0.00
> C
> ATOM    475  CD2 LEU A  32       8.717 -11.800   7.663  1.00  0.00
> C
> ATOM    476  H   LEU A  32      11.465 -11.458   3.738  1.00  0.00
> H
> ATOM    477  HA  LEU A  32      11.364 -12.470   6.454  1.00  0.00
> H
> ATOM    478  HB2 LEU A  32       9.125 -12.989   4.506  1.00  0.00
> H
> ATOM    479  HB3 LEU A  32       9.310 -13.744   6.860  1.00  0.00
> H
> ATOM    480  HG  LEU A  32       9.500 -10.770   5.836  1.00  0.00
> H
> ATOM    481 HD11 LEU A  32       6.543 -11.609   6.500  1.00  0.00
> H
> ATOM    482 HD12 LEU A  32       7.700 -12.784   5.270  1.00  0.00
> H
> ATOM    483 HD13 LEU A  32       7.390 -11.590   4.901  1.00  0.00
> H
> ATOM    484 HD21 LEU A  32       8.590 -12.824   7.978  1.00  0.00
> H
> ATOM    485 HD22 LEU A  32       7.929 -11.194   8.880  1.00  0.00
> H
> ATOM    486 HD23 LEU A  32       9.675 -11.434   7.998  1.00  0.00
> H
> ATOM    487  N   SER A  33      12.480 -14.508   5.625  1.00  0.00
> N
> ATOM    488  CA  SER A  33      13.201 -15.683   5.147  1.00  0.00
> C
> ATOM    489  C   SER A  33      12.234 -16.743   4.633  1.00  0.00
> C
> ATOM    490  O   SER A  33      11.670 -16.798   5.260  1.00  0.00
> O
> ATOM    491  CB  SER A  33      14.660 -16.265   6.268  1.00  0.00
> C
> ATOM    492  OG  SER A  33      14.698 -15.237   7.110  1.00  0.00
> O
> ATOM    493  H   SER A  33      12.592 -14.225   6.555  1.00  0.00
> H
> ATOM    494  HA  SER A  33      13.842 -15.373   4.335  1.00  0.00
> H
> ATOM    495  HB2 SER A  33      13.447 -16.845   6.934  1.00  0.00
> H
> ATOM    496  HB3 SER A  33      14.826 -16.902   5.837  1.00  0.00
> H
> ATOM    497  HG  SER A  33      14.940 -14.906   7.678  1.00  0.00
> H
> ATOM    498  N   PRO A  34      12.727 -17.609   3.735  1.00  0.00
> N
> ATOM    499  CA  PRO A  34      11.923 -18.685   3.148  1.00  0.00
> C
> ATOM    500  C   PRO A  34      11.151 -19.472   4.201  1.00  0.00
> C
> ATOM    501  O   PRO A  34       9.970 -19.781   4.380  1.00  0.00
> O
> ATOM    502  CB  PRO A  34      12.965 -19.576   2.470  1.00  0.00
> C
> ATOM    503  CG  PRO A  34      14.104 -18.666   2.167  1.00  0.00
> C
> ATOM    504  CD  PRO A  34      14.107 -17.603   3.223  1.00  0.00
> C
> ATOM    505  HA  PRO A  34      11.234 -18.305   2.407  1.00  0.00
> H
> ATOM    506  HB2 PRO A  34      13.260 -20.368   3.145  1.00  0.00
> H
> ATOM    507  HB3 PRO A  34      12.550 -20.000   1.569  1.00  0.00
> H
> ATOM    508  HG2 PRO A  34      15.320 -19.215   2.200  1.00  0.00
> H
> ATOM    509  HG3 PRO A  34      13.967 -18.215   1.195  1.00  0.00
> H
> ATOM    510  HD2 PRO A  34      14.809 -17.854   4.500  1.00  0.00
> H
> ATOM    511  HD3 PRO A  34      14.353 -16.645   2.788  1.00  0.00
> H
> ATOM    512  N   PRO A  35      11.831 -19.806   5.308  1.00  0.00
> N
> ATOM    513  CA  PRO A  35      11.227 -20.562   6.409  1.00  0.00
> C
> ATOM    514  C   PRO A  35       9.875 -19.996   6.828  1.00  0.00
> C
> ATOM    515  O   PRO A  35       8.909 -20.739   7.000  1.00  0.00
> O
> ATOM    516  CB  PRO A  35      12.244 -20.409   7.543  1.00  0.00
> C
> ATOM    517  CG  PRO A  35      13.545 -20.174   6.855  1.00  0.00
> C
> ATOM    518  CD  PRO A  35      13.241 -19.472   5.569  1.00  0.00
> C
> ATOM    519  HA  PRO A  35      11.118 -21.607   6.160  1.00  0.00
> H
> ATOM    520  HB2 PRO A  35      11.968 -19.569   8.166  1.00  0.00
> H
> ATOM    521  HB3 PRO A  35      12.267 -21.311   8.135  1.00  0.00
> H
> ATOM    522  HG2 PRO A  35      14.178 -19.554   7.471  1.00  0.00
> H
> ATOM    523  HG3 PRO A  35      14.270 -21.118   6.651  1.00  0.00
> H
> ATOM    524  HD2 PRO A  35      13.368 -18.406   5.687  1.00  0.00
> H
> ATOM    525  HD3 PRO A  35      13.878 -19.845   4.781  1.00  0.00
> H
> ATOM    526  N   GLU A  36       9.812 -18.679   6.988  1.00  0.00
> N
> ATOM    527  CA  GLU A  36       8.576 -18.140   7.387  1.00  0.00
> C
> ATOM    528  C   GLU A  36       7.651 -17.823   6.189  1.00  0.00
> C
> ATOM    529  O   GLU A  36       6.557 -18.385   6.142  1.00  0.00
> O
> ATOM    530  CB  GLU A  36       8.883 -16.660   8.290  1.00  0.00
> C
> ATOM    531  CG  GLU A  36      10.120 -16.711   9.460  1.00  0.00
> C
> ATOM    532  CD  GLU A  36       9.519 -17.000  10.451  1.00  0.00
> C
> ATOM    533  OE1 GLU A  36       8.428 -16.510  10.810  1.00  0.00
> O
> ATOM    534  OE2 GLU A  36      10.223 -17.718  11.190  1.00  0.00
> O
> ATOM    535  H   GLU A  36      10.618 -18.139   6.836  1.00  0.00
> H
> ATOM    536  HA  GLU A  36       8.830 -18.644   8.112  1.00  0.00
> H
> ATOM    537  HB2 GLU A  36       9.156 -15.961   7.254  1.00  0.00
> H
> ATOM    538  HB3 GLU A  36       7.993 -16.302   8.527  1.00  0.00
> H
> ATOM    539  HG2 GLU A  36      10.704 -17.486   8.758  1.00  0.00
> H
> ATOM    540  HG3 GLU A  36      10.520 -15.757   9.500  1.00  0.00
> H
> ATOM    541  N   ARG A  37       8.100 -17.270   5.223  1.00  0.00
> N
> ATOM    542  CA  ARG A  37       7.311 -16.760   4.260  1.00  0.00
> C
> ATOM    543  C   ARG A  37       6.501 -17.989   3.624  1.00  0.00
> C
> ATOM    544  O   ARG A  37       5.342 -17.878   3.223  1.00  0.00
> O
> ATOM    545  CB  ARG A  37       8.223 -16.336   2.874  1.00  0.00
> C
> ATOM    546  CG  ARG A  37       7.497 -15.597   1.763  1.00  0.00
> C
> ATOM    547  CD  ARG A  37       8.312 -15.581   0.479  1.00  0.00
> C
> ATOM    548  NE  ARG A  37       8.576 -16.930  -0.170  1.00  0.00
> N
> ATOM    549  CZ  ARG A  37       9.347 -17.187  -1.670  1.00  0.00
> C
> ATOM    550  NH1 ARG A  37       9.925 -16.194  -1.730  1.00  0.00
> N
> ATOM    551  NH2 ARG A  37       9.539 -18.440  -1.458  1.00  0.00
> N
> ATOM    552  H   ARG A  37       8.979 -16.609   5.320  1.00  0.00
> H
> ATOM    553  HA  ARG A  37       6.631 -15.953   4.250  1.00  0.00
> H
> ATOM    554  HB2 ARG A  37       8.996 -15.690   3.262  1.00  0.00
> H
> ATOM    555  HB3 ARG A  37       8.680 -17.218   2.450  1.00  0.00
> H
> ATOM    556  HG2 ARG A  37       6.554 -16.870   1.572  1.00  0.00
> H
> ATOM    557  HG3 ARG A  37       7.317 -14.579   2.780  1.00  0.00
> H
> ATOM    558  HD2 ARG A  37       7.763 -15.320  -0.273  1.00  0.00
> H
> ATOM    559  HD3 ARG A  37       9.251 -15.870   0.671  1.00  0.00
> H
> ATOM    560  HE  ARG A  37       8.159 -17.677   0.457  1.00  0.00
> H
> ATOM    561 HH11 ARG A  37       9.782 -15.250  -1.437  1.00  0.00
> H
> ATOM    562 HH12 ARG A  37      10.506 -16.392  -2.519  1.00  0.00
> H
> ATOM    563 HH21 ARG A  37       9.105 -19.192  -0.962  1.00  0.00
> H
> ATOM    564 HH22 ARG A  37      10.119 -18.633  -2.250  1.00  0.00
> H
> ATOM    565  N   LYS A  38       7.119 -19.160   3.731  1.00  0.00
> N
> ATOM    566  CA  LYS A  38       6.458 -20.410   3.380  1.00  0.00
> C
> ATOM    567  C   LYS A  38       5.197 -20.614   4.216  1.00  0.00
> C
> ATOM    568  O   LYS A  38       4.104 -20.783   3.677  1.00  0.00
> O
> ATOM    569  CB  LYS A  38       7.411 -21.590   3.579  1.00  0.00
> C
> ATOM    570  CG  LYS A  38       8.461 -21.715   2.490  1.00  0.00
> C
> ATOM    571  CD  LYS A  38       9.722 -22.388   3.600  1.00  0.00
> C
> ATOM    572  CE  LYS A  38       9.562 -23.899   3.690  1.00  0.00
> C
> ATOM    573  NZ  LYS A  38      10.842 -24.579   3.415  1.00  0.00
> N
> ATOM    574  H   LYS A  38       8.450 -19.185   4.570  1.00  0.00
> H
> ATOM    575  HA  LYS A  38       6.178 -20.357   2.338  1.00  0.00
> H
> ATOM    576  HB2 LYS A  38       7.916 -21.472   4.526  1.00  0.00
> H
> ATOM    577  HB3 LYS A  38       6.835 -22.505   3.601  1.00  0.00
> H
> ATOM    578  HG2 LYS A  38       8.600 -22.302   1.680  1.00  0.00
> H
> ATOM    579  HG3 LYS A  38       8.713 -20.726   2.131  1.00  0.00
> H
> ATOM    580  HD2 LYS A  38      10.543 -22.152   2.345  1.00  0.00
> H
> ATOM    581  HD3 LYS A  38       9.939 -22.140   3.997  1.00  0.00
> H
> ATOM    582  HE2 LYS A  38       8.824 -24.138   3.819  1.00  0.00
> H
> ATOM    583  HE3 LYS A  38       9.225 -24.253   2.107  1.00  0.00
> H
> ATOM    584  HZ1 LYS A  38      11.184 -24.246   4.340  1.00  0.00
> H
> ATOM    585  HZ2 LYS A  38      11.562 -24.371   2.696  1.00  0.00
> H
> ATOM    586  HZ3 LYS A  38      10.699 -25.607   3.460  1.00  0.00
> H
> ATOM    587  N   ARG A  39       5.360 -20.594   5.534  1.00  0.00
> N
> ATOM    588  CA  ARG A  39       4.236 -20.777   6.445  1.00  0.00
> C
> ATOM    589  C   ARG A  39       3.203 -19.668   6.262  1.00  0.00
> C
> ATOM    590  O   ARG A  39       2.160 -19.936   6.710  1.00  0.00
> O
> ATOM    591  CB  ARG A  39       4.723 -20.798   7.894  1.00  0.00
> C
> ATOM    592  CG  ARG A  39       5.231 -22.159   8.345  1.00  0.00
> C
> ATOM    593  CD  ARG A  39       6.704 -22.341   8.120  1.00  0.00
> C
> ATOM    594  NE  ARG A  39       7.107 -23.744   8.670  1.00  0.00
> N
> ATOM    595  CZ  ARG A  39       8.373 -24.147   8.270  1.00  0.00
> C
> ATOM    596  NH1 ARG A  39       9.352 -23.259   7.936  1.00  0.00
> N
> ATOM    597  NH2 ARG A  39       8.659 -25.441   8.810  1.00  0.00
> N
> ATOM    598  H   ARG A  39       6.256 -20.455   5.904  1.00  0.00
> H
> ATOM    599  HA  ARG A  39       3.773 -21.725   6.216  1.00  0.00
> H
> ATOM    600  HB2 ARG A  39       5.527 -20.840   8.300  1.00  0.00
> H
> ATOM    601  HB3 ARG A  39       3.908 -20.510   8.541  1.00  0.00
> H
> ATOM    602  HG2 ARG A  39       5.103 -22.244   9.414  1.00  0.00
> H
> ATOM    603  HG3 ARG A  39       4.661 -22.929   7.848  1.00  0.00
> H
> ATOM    604  HD2 ARG A  39       6.885 -21.962   7.180  1.00  0.00
> H
> ATOM    605  HD3 ARG A  39       7.291 -21.780   8.723  1.00  0.00
> H
> ATOM    606  HE  ARG A  39       6.399 -24.417   8.133  1.00  0.00
> H
> ATOM    607 HH11 ARG A  39       9.138 -22.283   7.897  1.00  0.00
> H
> ATOM    608 HH12 ARG A  39      10.303 -23.565   7.908  1.00  0.00
> H
> ATOM    609 HH21 ARG A  39       7.923 -26.114   8.149  1.00  0.00
> H
> ATOM    610 HH22 ARG A  39       9.612 -25.743   8.520  1.00  0.00
> H
> ATOM    611  N   LEU A  40       3.661 -18.423   6.322  1.00  0.00
> N
> ATOM    612  CA  LEU A  40       2.779 -17.274   6.164  1.00  0.00
> C
> ATOM    613  C   LEU A  40       1.837 -17.469   4.980  1.00  0.00
> C
> ATOM    614  O   LEU A  40       0.622 -17.322   5.111  1.00  0.00
> O
> ATOM    615  CB  LEU A  40       3.599 -15.998   5.970  1.00  0.00
> C
> ATOM    616  CG  LEU A  40       2.823 -14.682   6.440  1.00  0.00
> C
> ATOM    617  CD1 LEU A  40       2.332 -14.430   7.460  1.00  0.00
> C
> ATOM    618  CD2 LEU A  40       3.687 -13.524   5.564  1.00  0.00
> C
> ATOM    619  H   LEU A  40       4.618 -18.272   6.478  1.00  0.00
> H
> ATOM    620  HA  LEU A  40       2.190 -17.180   7.650  1.00  0.00
> H
> ATOM    621  HB2 LEU A  40       4.361 -15.975   6.736  1.00  0.00
> H
> ATOM    622  HB3 LEU A  40       4.700 -16.520   4.999  1.00  0.00
> H
> ATOM    623  HG  LEU A  40       1.958 -14.746   5.397  1.00  0.00
> H
> ATOM    624 HD11 LEU A  40       3.158 -14.517   8.149  1.00  0.00
> H
> ATOM    625 HD12 LEU A  40       1.575 -15.157   7.713  1.00  0.00
> H
> ATOM    626 HD13 LEU A  40       1.912 -13.437   7.525  1.00  0.00
> H
> ATOM    627 HD21 LEU A  40       4.163 -13.550   6.412  1.00  0.00
> H
> ATOM    628 HD22 LEU A  40       3.690 -12.802   5.510  1.00  0.00
> H
> ATOM    629 HD23 LEU A  40       4.442 -13.897   4.888  1.00  0.00
> H
> --
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before
> posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php



More information about the gromacs.org_gmx-users mailing list