[gmx-users] dimer simulation

sanjay23 at iitb.ac.in sanjay23 at iitb.ac.in
Wed Aug 11 06:30:46 CEST 2010

Dear gmx-users
I want to simulate a protein which biological function defined by dimer
formation. I need to simulate this protein in dimer as well as in
monomeric form to solve my objectives. I am using Gromacs-4.0.4 for
simulation. I have a doubt, is there any specific parameters for dimer
simulation or we have to use similar parameters like monomer protein
simulation. I read some literature's on dimer simulation but they are
using similar parameters like monomer.
Sanjay Kumar Upadhyay
Research Scholor
Protein Dynamics lab
Dept of Chemistry
IIT Powai, Mumbai, 400076
Ph no. 09920200345, 09699353562,

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