[gmx-users] dimer simulation

[sanjay23 at iitb.ac.in]

Dear gmx-users
I want to simulate a protein which biological function defined by dimer
formation. I need to simulate this protein in dimer as well as in
monomeric form to solve my objectives. I am using Gromacs-4.0.4 for
simulation. I have a doubt, is there any specific parameters for dimer
simulation or we have to use similar parameters like monomer protein
simulation. I read some literature's on dimer simulation but they are
using similar parameters like monomer.
-- 
Regards
Sanjay Kumar Upadhyay
Research Scholor
Protein Dynamics lab
Dept of Chemistry
IIT Powai, Mumbai, 400076
Ph no. 09920200345, 09699353562,