[gmx-users] about do_dssp

[Justin A. Lemkul]

babu gokul wrote:
> dear all
> I am analyzing  a collagen dynamics i would like to analysis the 
> collagen structure in and its parameter ? what is the difference between 
> beta bridge and beta strand.
> 

I would suggest you have a look at the DSSP paper.

http://www.gromacs.org/Developer_Zone/Programming_Guide/DSSP

-Justin

> thank you 
> E R azhagiya singam
> 

-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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