pwnrghv at gmail.com
Sat Aug 14 18:12:06 CEST 2010
I have done PCA using first g_covar and got eigval.xvg and eigenvec.trr
files. The eigenvectors were analyzed by g_anaeig program and got
eigcomp.xvg, eigrmsf.xvg, proj.xvg, and 2dproj.xvg files. Then I want to
1. Which file among these shows relative positional fluctuation with
2. Probability distributions for the displacements along several
3. Absolute values of the projections of the (normalized) extracted vectors.
4. Cumulative percentage of the motion of a protein from eigvalues.xvg file
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