[gmx-users] Fatal error:Chain identifier

[ahmet yıldırım]

Dear Mark,

The chain identifier have continuous. In sequence does not show any problem.



29 Aralık 2010 15:10 tarihinde Mark Abraham <Mark.Abraham at anu.edu.au> yazdı:

> On 29/12/2010 10:12 PM, ahmet yıldırım wrote:
>
>> Dear users,
>>
>> ab at ubuntu:~/Desktop/3O87$ pdb2gmx -f 3O87.pdb -water tip3p
>>
>> Select the Force Field:
>> 5: OPLS-AA/L all-atom force field (2001 aminoacid dihedrals)
>>
>> Fatal error:
>> Chain identifier 'A' was used in two non-sequential blocks (residue 710,
>> atom 54 49)
>>
>> What should I do to correct this error?
>>
>
> Look at the entries whose chain identifier is A, and see why they are
> non-sequential, and take suitable action to remedy. You may need to Google
> for the PDB file format if you don't already understand it.
>
> Mark
>
>
>
>> Thanks in advance
>>
>> --
>> Ahmet YILDIRIM
>>
>
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-- 
Ahmet YILDIRIM
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