[gmx-users] order parameter for UAFF model

[afsaneh maleki]

Hi all,

i used united the atom force field model for the membrane lipids . to
calculate order parameter i used :
g_order  -od   -d

 i know united atom force field doesn't  have hydrogen atoms in hydrocarbons
chains .
 i want to know gromacs calculates order parameter * Sc-c* or
*Sc-d*(Deuterium) ?

 in the output is written:  title "Deuterium order parameters"

thanks in advance,
Afsaneh
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20100207/bb8c3b42/attachment.html>