[gmx-users] order parameter for UAFF model

afsaneh maleki maleki.afsaneh at gmail.com
Sun Feb 7 15:53:22 CET 2010

Hi all,

i used united the atom force field model for the membrane lipids . to
calculate order parameter i used :
g_order  -od   -d

 i know united atom force field doesn't  have hydrogen atoms in hydrocarbons
chains .
 i want to know gromacs calculates order parameter * Sc-c* or
*Sc-d*(Deuterium) ?

 in the output is written:  title "Deuterium order parameters"

thanks in advance,
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