[gmx-users] RMSD of Different Simulations

V Hariharan vhariharan2.gromacs at gmail.com
Tue Feb 9 00:20:44 CET 2010

Hello All,

I've taken the average peptide structure from two different MD simulations
using g_rmsf.  Is there a method for calculating the RMSD between those two
structures? The only difference between the two peptides is a single residue
mutation.  Thanks.

Venkatesh Hariharan
Columbia University | Biomedical Engineering
Graduate Research Assistant

"You must be the change you wish to see in the world."
--Mohandas Karamchand Gandhi
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