[gmx-users] Problem installin gmx

Chandan Choudhury iitdckc at gmail.com
Fri Feb 12 15:38:21 CET 2010

Hello gmx users !!

I installed successfully installed fftw. Then tried compiling gmx parallely
I executed the command

$ ./configure --enable-mpi --prefix=/home/vanka/NUM-GEN/GRO/
It didnot show any problem.


make[5]: Entering directory
rm -f kernel-stamp
./mknb  -software_invsqrt
make[5]: *** [kernel-stamp] Segmentation fault
make[5]: Leaving directory
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory
make[3]: *** [all-recursive] Error 1
make[3]: Leaving directory `/home/vanka/NUM-GEN/gromacs-4.0.7/src/gmxlib'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/home/vanka/NUM-GEN/gromacs-4.0.7/src'
make[1]: *** [all] Error 2
make[1]: Leaving directory `/home/vanka/NUM-GEN/gromacs-4.0.7/src'
make: *** [all-recursive] Error 1

Cannot get the error


Chandan kumar Choudhury
NCL, Pune
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