[gmx-users] value of an angle

Amir Marcovitz amarcovitz at gmail.com
Thu Feb 25 11:55:55 CET 2010


Hi,

if you are interested in a particular angle (between a triad of atoms) you
can specify it in angle.ndx file (to generate the angles run: mk_angndx -s
topol.tpr -n angle.ndx)

the -ov flag of g_angle will generate the angle trajectory and the -od flag
will generate its distribution

cheers

On Wed, Feb 24, 2010 at 10:22 PM, Carla Jamous <carlajamous at gmail.com>wrote:

> Hi everyone,
> please I'm trying to find a way to calculate the value of an angle during
> the time of my simulation. g_angle calculates a distribution or an average.
>
> Thanks,
> Carla
>
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