[gmx-users] Re: Obtain a pre-version of gromacs 4.1 without git

Justin A. Lemkul jalemkul at vt.edu
Tue Jan 26 20:00:00 CET 2010



Stephane Abel wrote:
> Thank you Roland for your response
> 
> I have effectively downloaded from the 
> http://repo.or.cz/w/gromacs.git/snapshot/HEAD.tar.gz, the HEAD version 
> of gmx Unfortunately, the unpacked directory does not contain a 
> configure file, I have only an configure.ac.
> 
> So my question is: how to obtain a fully fonctional version of 4.1 
> without using git
> 

In the code you downloaded, there should be a script called "bootstrap" which 
you can execute to generate the configure file.

-Justin

> Thank you for your response
>>
>> Hi,
>>
>> there is currently no web-interface on the official git server. Thus
>> repo.or.wz is probably the best solution.
>> I checked that http://repo.or.cz/w/gromacs.git/snapshot/HEAD.tar.gz is
>> up-to-date.
>>
>> Roland
>>
>> On Tue, Feb 23, 2010 at 8:31 AM, intra\sa175950 
>> <stephane.abel at cea.fr>wrote:
>>
>>  
>>>  Hi all,
>>>
>>>
>>>
>>> For a future project, I would like to use gromacs for simulations 
>>> with the
>>> CHARMM force field. I am aware that the CHARMM ff is not yet 
>>> “officially”
>>> supported by gromacs, even if a paper about this port will be published
>>> soon. By reading the mailing list, I understand that a beta version of
>>> gmx4.1 is available for testing from the git depositary. I have tried 
>>> to use
>>> git, but since I am behind a firewall, I cannot easily access to the
>>> depositary. I have tried to obtain a previous from
>>> http://repo.or.cz/w/gromacs.git through the master branch but I am not
>>> sure that the file downloaded was the latest version. Therefore, my 
>>> question
>>> is how to obtain the latest version of pre gmx4.1 without using git ?
>>>
>>>
>>>
>>> Thank you for your help
>>>
>>>
>>>
>>> Stéphane
>>>
>>> -- 
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>>>     
>>
>>
>>
>>   
> 

-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================



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