[gmx-users] g_cluster Jarvis-Patrick

Marc Charendoff mcharend at sbcglobal.net
Tue Jul 13 20:51:09 CEST 2010


     In the Jarvis-Patrick method g_cluster shows that when M=0, the cutoff is 
used to determine nearest neighbors (those within X.X nm). In the absence of 
cutoff - e.g. M is defaulted to 10, how are nearest neighbors determined? What 
does M=10 (or anyother number) mean?

Thanks, Marc
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