[gmx-users] Avoid generation of angles, pairs and dihedrals from pdb2gmx

C. Batistakis cbatiss at yahoo.gr
Fri Jul 16 16:45:44 CEST 2010

Dear all

According to the manual, pdb2gmx generates all the angles, pairs and dihedrals automatically in a polymer chain. Because I need nothing of them do you know any fast way to avoid this generation?

The only think I found in the manual is to add [ exclusions ] in the .rtp file for whatever I don't want to be generated, but I am wondering if there is any better way.

Thanks in advance

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